STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_06870Trafficking protein particle complex subunit 13. (336 aa)    
Predicted Functional Partners:
AAWM_07606
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.974
AAWM_01952
Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.
    
 0.970
AAWM_06925
Trafficking protein particle complex subunit 2-like protein.
    
 0.968
AAWM_11051
Transport protein particle 20 kDa subunit.
   
 0.965
AAWM_05229
Uncharacterized protein.
   
 0.962
AAWM_03908
Trafficking protein particle complex subunit BET3.
    
 0.952
AAWM_06329
Transport protein particle subunit trs85-2.
   
 0.948
AAWM_05580
Trafficking protein particle complex subunit 10.
     
 0.936
AAWM_10893
Transport protein particle subunit trs120.
     
 0.933
AAWM_07665
Uncharacterized protein.
   
 0.911
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.