STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_07076Zinc transporter YKE4. (421 aa)    
Predicted Functional Partners:
AAWM_10880
Imidazoleglycerol-phosphate dehydratase.
 
    
 0.900
AAWM_07125
Protein transport protein SEC61 subunit alpha.
   
  
 0.686
AAWM_06041
Zinc transporter 5.
  
 0.667
AAWM_10652
Zinc/cadmium resistance protein.
  
 0.628
AAWM_01542
Zinc transporter ZIP9-A.
    
 
 0.536
AAWM_11053
Zinc-regulated transporter 3.
    
 
 0.532
AAWM_08096
Prefoldin subunit 6.
   
  
 0.531
AAWM_02394
Homeobox protein HD-10.
    
 
 0.463
AAWM_00661
37S ribosomal protein S26, mitochondrial.
  
    0.459
AAWM_06555
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
    0.459
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.