STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_07180Uncharacterized protein. (459 aa)    
Predicted Functional Partners:
AAWM_05996
Mitochondrial RNA-splicing protein MRS3; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
 0.581
AAWM_10836
Pumilio homolog 2.
    
   0.552
AAWM_02449
Meiotic coiled-coil protein 2.
    
   0.480
AAWM_02247
U2 small nuclear ribonucleoprotein A.
      
 0.461
AAWM_05051
KIX_2 domain-containing protein.
  
     0.432
AAWM_04426
Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.
    
 
 0.422
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.