STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_07155Poly(A) RNA polymerase cid13. (996 aa)    
Predicted Functional Partners:
AAWM_02435
Protein kinase rad3; Belongs to the PI3/PI4-kinase family.
    
  0.715
AAWM_09730
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.700
AAWM_06117
Extracellular exo-inulinase inuE; Belongs to the glycosyl hydrolase 32 family.
   
 0.696
AAWM_00394
Uncharacterized RNA-binding protein C1861.04c.
    
 
 0.665
AAWM_01082
ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family.
    
 0.658
AAWM_00995
ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family.
    
 0.648
AAWM_03985
Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.
    
 0.642
AAWM_05122
UPF0662 protein C30C2.08.
    
 0.632
AAWM_05525
Eukaryotic translation initiation factor 4E type 3-B; Belongs to the eukaryotic initiation factor 4E family.
    
 0.632
AAWM_10397
Probable RNA-binding protein sce3.
    
  0.629
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.