STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_07401Ubiquitin-conjugating enzyme E2 pex4; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)    
Predicted Functional Partners:
AAWM_03523
Probable ubiquitin fusion degradation protein C12B10.01c.
   
 0.994
AAWM_06443
Polyubiquitin.
   
 0.967
AAWM_10454
Ubiquitin-activating enzyme E1 1; Belongs to the ubiquitin-activating E1 family.
   
 0.967
AAWM_09742
Ubiquitin-60S ribosomal protein L40.
   
 0.963
AAWM_01630
STIP1 homology and U box-containing protein 1.
    
 0.955
AAWM_06324
Peroxisome assembly protein 12.
    
 0.926
AAWM_07624
E3 ubiquitin-protein ligase RBX1.
    
 0.924
AAWM_10037
Peroxisome biogenesis factor 10.
    
 0.917
AAWM_06799
Ubiquitin conjugation factor E4.
    
 0.912
AAWM_09426
Ubiquitin-conjugating enzyme spm2.
   
0.903
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.