STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_07570WHIM1 domain-containing protein. (565 aa)    
Predicted Functional Partners:
AAWM_10915
Elongator complex protein 2.
 
      0.863
AAWM_09742
Ubiquitin-60S ribosomal protein L40.
    
 0.810
AAWM_03523
Probable ubiquitin fusion degradation protein C12B10.01c.
   
 
 0.802
AAWM_05665
AN1-type zinc finger protein TMC1.
   
 0.767
AAWM_06443
Polyubiquitin.
   
 0.767
AAWM_01349
Ubiquitin-40S ribosomal protein S27a.
   
 0.688
AAWM_06897
BZIP domain-containing protein.
   
 0.688
AAWM_00220
Elongation factor 3.
   
   0.673
AAWM_05441
Proteasomal ubiquitin receptor ADRM1 homolog.
   
 
 0.661
AAWM_00760
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
    
 0.637
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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