STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_07642Zinc finger with UFM1-specific peptidase domain protein. (455 aa)    
Predicted Functional Partners:
AAWM_06443
Polyubiquitin.
    
 
 0.933
AAWM_09742
Ubiquitin-60S ribosomal protein L40.
    
 
 0.912
AAWM_05665
AN1-type zinc finger protein TMC1.
    
 
 0.900
AAWM_07643
Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation.
 
      0.746
AAWM_01349
Ubiquitin-40S ribosomal protein S27a.
    
 
 0.667
AAWM_06897
BZIP domain-containing protein.
    
 
 0.667
AAWM_10997
Ubiquitin-like protein 1.
    
 
 0.650
AAWM_00560
Protein BOI2.
    
 
 0.610
AAWM_05846
Deubiquitination-protection protein dph1.
    
 
 0.610
AAWM_07600
UV excision repair protein rhp23.
    
 
 0.600
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.