STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_08023Probable kinetochore protein ndc80. (746 aa)    
Predicted Functional Partners:
AAWM_05048
Probable kinetochore protein nuf2.
  
 0.999
AAWM_05209
Probable kinetochore protein spc25.
   
 0.999
AAWM_03167
Checkpoint serine/threonine-protein kinase BUB1.
   
 0.983
AAWM_04682
Protein kinase domain-containing protein.
   
 
 0.974
AAWM_01684
Probable kinetochore protein spc24.
    
 
 0.969
AAWM_02643
Mitotic spindle checkpoint component mad2.
   
 0.969
AAWM_05958
Spindle pole body component alp14.
    
 
 0.960
AAWM_01626
Structural maintenance of chromosomes protein.
   
 
 0.930
AAWM_00249
Separin.
   
 
 0.922
AAWM_09982
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.916
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.