STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_08224Uncharacterized protein C22E12.19. (2116 aa)    
Predicted Functional Partners:
AAWM_03815
Transcription initiation factor TFIID subunit 12.
  
 
 0.989
AAWM_05991
F-box-like/WD repeat-containing protein TBL1Y.
  
 0.985
AAWM_09026
Transcription initiation factor TFIID subunit 9.
    
 0.983
AAWM_05716
SAGA complex subunit spt3.
    
 0.981
AAWM_09577
Transcription initiation factor TFIID subunit 5.
   
 0.979
AAWM_05036
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.978
AAWM_01097
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
   
 0.975
AAWM_09693
Chromatin-remodeling complexes subunit NGG1.
    
 0.967
AAWM_05658
SAGA-associated factor 29.
    
 0.961
AAWM_02510
Transcription initiation factor TFIID subunit 6.
    
 0.957
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.