STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_08362Uncharacterized protein. (670 aa)    
Predicted Functional Partners:
AAWM_08028
TATA-box-binding protein.
    
  0.702
AAWM_00635
Nitrate reductase [NADH] 1.
  
  0.693
AAWM_05610
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
  0.693
AAWM_06006
HMG box-containing protein C19G7.04.
    
  0.665
AAWM_09983
Serine/threonine-protein kinase KIN28; Belongs to the protein kinase superfamily.
    
  0.564
AAWM_06629
RNA polymerase II transcription factor B subunit 3.
    
 0.463
AAWM_09555
RNA polymerase I-specific transcription initiation factor rrn3.
    
 0.463
AAWM_02544
DNA repair helicase RAD25.
    
  0.440
AAWM_07485
Cyclin CCL1; Belongs to the cyclin family.
    
  0.439
AAWM_09787
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 
  0.415
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.