STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_08559L-2,4-diaminobutyrate decarboxylase. (500 aa)    
Predicted Functional Partners:
AAWM_02668
2,2-dialkylglycine decarboxylase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.954
AAWM_09211
Uncharacterized aminotransferase C1771.03c; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.896
AAWM_10742
Acetylornithine aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.829
AAWM_06607
Ornithine aminotransferase.
 
   
 0.821
AAWM_09029
Histidine biosynthesis trifunctional protein.
    
 0.690
AAWM_01687
Tryptophan synthase.
    
 0.675
AAWM_05046
Tryptophan synthase.
    
 0.675
AAWM_08133
Tryptophan synthase.
    
 0.675
AAWM_04846
Pantoate--beta-alanine ligase.
  
 
 0.638
AAWM_00635
Nitrate reductase [NADH] 1.
   
  0.625
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.