STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_09201Transcription factor ACEII. (545 aa)    
Predicted Functional Partners:
AAWM_05748
Replication factor A protein 2.
    
  0.692
AAWM_03769
Histone-lysine N-methyltransferase ash1.
   
  0.674
AAWM_00755
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.646
AAWM_09582
ATP-dependent DNA helicase mph1.
    
  0.629
AAWM_04467
DNA repair protein rad16.
    
  0.628
AAWM_02567
Histone acetyltransferase type B subunit 2.
    
 0.571
AAWM_09574
Nuclear protein localization protein 4.
    
  0.556
AAWM_01202
Crossover junction endonuclease mus81.
    
  0.540
AAWM_00709
Histone-fold domain-containing protein new1.
    
  0.530
AAWM_07657
Uncharacterized protein.
    
  0.530
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.