STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_09354Transcription factor tau subunit sfc1. (710 aa)    
Predicted Functional Partners:
AAWM_09656
Transcription factor tau subunit sfc4.
   
 0.972
AAWM_10391
Transcription factor tau subunit sfc3.
    
 0.947
AAWM_07996
Transcription factor tau subunit sfc6.
    
 0.916
AAWM_01204
Transcription factor IIIB 60 kDa subunit.
    
 0.877
AAWM_10851
Transcription factor TFIIIB component B.
    
 0.857
AAWM_08028
TATA-box-binding protein.
    
 0.769
AAWM_02463
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.766
AAWM_08907
Transcription factor tau 55 kDa subunit.
    
 
 0.758
AAWM_02645
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.731
AAWM_10414
DNA-directed RNA polymerase III subunit rpc4.
     
 0.704
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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