STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_09618Vacuolar protein sorting-associated protein vts1. (418 aa)    
Predicted Functional Partners:
AAWM_06508
Charged multivesicular body protein 5.
   
 0.998
AAWM_08095
Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.
   
 0.997
AAWM_05709
Vacuolar protein sorting-associated protein IST1.
   
 
 0.945
AAWM_05091
Pre-mRNA-splicing factor SPF27 homolog.
   
   0.920
AAWM_05086
Vacuolar-sorting protein snf7.
    
 0.918
AAWM_07913
Neutrophil cytosol factor 2.
    
   0.918
AAWM_02063
DOA4-independent degradation protein 4.
    
 0.913
AAWM_02566
GTP cyclohydrolase 1.
   
   0.889
AAWM_08422
GTP cyclohydrolase 1.
   
   0.889
AAWM_05819
Reticulon-like protein.
    
   0.883
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.