STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_09638N-terminal acetyltransferase B complex catalytic subunit naa20. (190 aa)    
Predicted Functional Partners:
AAWM_04847
ATP-dependent RNA helicase dbp7; Belongs to the DEAD box helicase family.
    
   0.564
AAWM_09439
N-alpha-acetyltransferase 16, NatA auxiliary subunit.
   
 
 0.534
AAWM_04429
Pre-mRNA-splicing factor cwf24.
   
  
 0.490
AAWM_06717
Uncharacterized N-acetyltransferase C825.04c.
      
 0.489
AAWM_08050
N-alpha-acetyltransferase 30.
      
 0.489
AAWM_11122
N-alpha-acetyltransferase 35, NatC auxiliary subunit.
      
 0.482
AAWM_05715
Diphthine methyl ester synthase.
      
 0.445
AAWM_05349
Pre-mRNA-splicing factor clf1.
      
 0.433
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.