STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_09605LisH domain-containing protein. (486 aa)    
Predicted Functional Partners:
AAWM_00261
UBA domain-containing protein 7.
    
 0.666
AAWM_09020
Set1 complex component swd1.
    
 0.654
AAWM_09958
Set1 complex component ash2.
    
 0.645
AAWM_01884
Tankyrase-1.
    
  0.596
AAWM_05411
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.595
AAWM_06927
Nucleoporin NUP133.
    
  0.590
AAWM_02957
Putative ankyrin repeat protein RF_0381.
    
  0.571
AAWM_03936
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.554
AAWM_06904
Protein transport protein sec13; Belongs to the WD repeat SEC13 family.
    
 0.552
AAWM_09742
Ubiquitin-60S ribosomal protein L40.
    
  0.548
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.