STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_0971237S ribosomal protein mrp10, mitochondrial; Involved in mitochondrial genome encoded proteins translation. (101 aa)    
Predicted Functional Partners:
AAWM_03539
54S ribosomal protein L6, mitochondrial; Belongs to the universal ribosomal protein uL6 family.
    
  0.931
AAWM_06807
37S ribosomal protein S25, mitochondrial.
   
 
 0.924
AAWM_02121
37S ribosomal protein S12, mitochondrial.
   
 
 0.922
AAWM_01159
30S ribosomal protein S15.
   
 
 0.919
AAWM_05101
37S ribosomal protein MRP4, mitochondrial.
   
 
 0.919
AAWM_00647
37S ribosomal protein S8, mitochondrial.
   
 
 0.918
AAWM_04931
Probable 37S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.918
AAWM_07108
Ribosomal protein S16, mitochondrial.
   
 
 0.918
AAWM_00661
37S ribosomal protein S26, mitochondrial.
   
 
 0.917
AAWM_09728
54S ribosomal protein L27, mitochondrial.
   
 
 0.915
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.