STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_09860SWI/SNF and RSC complexes subunit arp9; Belongs to the actin family. (668 aa)    
Predicted Functional Partners:
AAWM_05524
Nipped-B-like protein B.
    
 0.980
AAWM_03865
Chromatin structure-remodeling complex subunit RSC1.
  
 
 0.969
AAWM_00200
SWI/SNF and RSC complexes subunit ssr2.
    
 0.964
AAWM_06313
SWI/SNF chromatin-remodeling complex subunit snf5.
    
 0.964
AAWM_07574
Chromatin structure-remodeling complex subunit snf21.
    
 0.949
AAWM_05085
Chromatin structure-remodeling complex subunit rsc7.
   
 0.944
AAWM_01338
SWI/SNF chromatin-remodeling complex subunit sol1.
    
 
 0.941
AAWM_03223
Chromatin structure-remodeling complex subunit rsc9.
    
 
 0.937
AAWM_00772
Actin-related protein 4; Belongs to the actin family.
    
0.912
AAWM_01634
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.890
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.