STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_10055Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (393 aa)    
Predicted Functional Partners:
AAWM_06473
Geranylgeranyl transferase type-2 subunit alpha.
    
 0.981
AAWM_02438
GTP-binding protein ypt2.
    
 0.835
AAWM_10056
Uncharacterized protein.
 
      0.808
AAWM_04426
Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.
    
 0.797
AAWM_09520
Ras-related protein Rab-11A.
    
 0.793
AAWM_00747
Ras-related protein RABB1b.
    
 0.766
AAWM_01621
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.737
AAWM_02253
Ras-like GTP-binding protein RYL2.
    
 0.722
AAWM_06733
MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
    
 0.722
AAWM_10477
Ras-related protein Rab-6A.
    
 0.698
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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