STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_10506Ornithine decarboxylase. (187 aa)    
Predicted Functional Partners:
AAWM_05672
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 0.932
AAWM_01331
Arginase; Belongs to the arginase family.
  
 
 0.923
AAWM_02337
Arginase; Belongs to the arginase family.
  
 
 0.921
AAWM_06607
Ornithine aminotransferase.
    
 0.919
AAWM_07070
Putative agmatinase 1; Belongs to the arginase family.
  
 
 0.869
AAWM_00809
Putative agmatinase 2; Belongs to the arginase family.
  
 
 0.859
AAWM_03738
Probable aspartate-semialdehyde dehydrogenase.
  
 
 0.859
AAWM_06735
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
  
 
0.822
AAWM_01316
Homoserine dehydrogenase.
  
 
 0.793
AAWM_09708
Uncharacterized protein YGL159W.
  
 
 0.793
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.