STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_10454Ubiquitin-activating enzyme E1 1; Belongs to the ubiquitin-activating E1 family. (1415 aa)    
Predicted Functional Partners:
AAWM_06443
Polyubiquitin.
   
 0.994
AAWM_03523
Probable ubiquitin fusion degradation protein C12B10.01c.
   
 0.986
AAWM_00302
Ubiquitin-conjugating enzyme E2-34 kDa; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.983
AAWM_04476
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.982
AAWM_07486
Ubiquitin-conjugating enzyme E2 1; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.979
AAWM_09742
Ubiquitin-60S ribosomal protein L40.
    
 0.977
AAWM_03821
Ubiquitin-conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.975
AAWM_02507
Ubiquitin-conjugating enzyme E2-18 kDa; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.969
AAWM_05665
AN1-type zinc finger protein TMC1.
   
 0.969
AAWM_07401
Ubiquitin-conjugating enzyme E2 pex4; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.967
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.