STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_10702Rho1 guanine nucleotide exchange factor 3. (1836 aa)    
Predicted Functional Partners:
AAWM_05524
Nipped-B-like protein B.
    
  0.969
AAWM_03081
Arrestin family protein 1.
    
 
 0.968
AAWM_05140
GTP-binding protein rhoA.
    
 0.915
AAWM_00379
Rho1 guanine nucleotide exchange factor 1.
    
0.903
AAWM_02016
GTP-binding protein rhoC.
    
 0.868
AAWM_08004
GTP-binding protein rho2.
    
 0.865
AAWM_04876
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
 0.842
AAWM_08014
Septation protein imp2.
   
 0.823
AAWM_01157
GTP-binding protein RHO2.
    
 0.812
AAWM_03745
GTP-binding protein RHO3.
    
 0.812
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.