STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_10838Putative ATP-dependent RNA helicase PB1A10.06c. (1199 aa)    
Predicted Functional Partners:
AAWM_07685
Probable nucleolar complex protein 14.
 
 
 0.996
AAWM_01723
Probable U3 small nucleolar RNA-associated protein 7.
   
 0.993
AAWM_05445
Something about silencing protein 10.
   
 0.993
AAWM_10427
rRNA biogenesis protein rrp5.
  
 0.993
AAWM_02570
Periodic tryptophan protein 2 homolog.
   
 
 0.991
AAWM_07803
Uncharacterized protein C1604.06c.
   
  0.991
AAWM_00220
Elongation factor 3.
   
   0.990
AAWM_00610
U3 small nucleolar RNA-associated protein 4.
   
 0.990
AAWM_03872
U3 small nucleolar RNA-associated protein 22.
   
  0.990
AAWM_05524
Nipped-B-like protein B.
    
  0.988
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.