STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_10868Uncharacterized FCP1 homology domain-containing protein C1271.03c. (655 aa)    
Predicted Functional Partners:
AAWM_09968
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.885
AAWM_09025
Nuclear elongation and deformation protein 1.
    
 0.870
AAWM_01746
Mitochondrial import inner membrane translocase subunit tim23.
    
 0.853
AAWM_07924
Mitochondrial import inner membrane translocase subunit tim21.
    
 0.834
AAWM_07808
Transcription initiation factor IIF subunit beta.
    
 0.821
AAWM_01010
DNA-directed RNA polymerase II subunit rpb4.
    
 0.811
AAWM_01451
DNA-directed RNA polymerases I and III subunit RPAC1.
    
 0.805
AAWM_01704
DNA-directed RNA polymerase II subunit RPB3.
    
 0.805
AAWM_07791
DNA-directed RNA polymerase II subunit rpb7.
    
 0.800
AAWM_07790
Uncharacterized protein.
    
 0.800
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.