STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_10817Protein transport protein sec22; Belongs to the synaptobrevin family. (215 aa)    
Predicted Functional Partners:
AAWM_00907
Integral membrane protein sed5.
   
 0.998
AAWM_00189
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
    
 0.997
AAWM_00720
Protein transport protein BET1.
   
 0.996
AAWM_09612
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.993
AAWM_01725
Probable vesicular-fusion protein sec17 homolog.
   
 0.992
AAWM_05970
Protein transport protein sec24.
    
 0.992
AAWM_06345
Synaptobrevin homolog YKT6; Belongs to the synaptobrevin family.
    
 0.989
AAWM_02640
Protein sly1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.982
AAWM_06820
Syntaxin-22; Belongs to the syntaxin family.
    
 0.980
AAWM_05380
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 
 0.978
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.