STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_10867Elongation factor 1-gamma 1. (411 aa)    
Predicted Functional Partners:
AAWM_05057
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.999
AAWM_05448
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
  
 0.999
AAWM_00220
Elongation factor 3.
   
 
 0.995
AAWM_10774
[NU+] prion formation protein 1.
   
 
 0.993
AAWM_01433
Elongation factor 2.
   
 
 0.961
AAWM_09215
Translationally-controlled tumor protein homolog; Belongs to the TCTP family.
   
 
 0.953
AAWM_05442
60S ribosomal protein L6-B.
   
 
 0.945
AAWM_03987
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.943
AAWM_07750
Valine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.943
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.934
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.