STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_11105DNA repair protein RAD5. (2141 aa)    
Predicted Functional Partners:
AAWM_06327
Postreplication repair E3 ubiquitin-protein ligase rad18.
    
 0.885
AAWM_09426
Ubiquitin-conjugating enzyme spm2.
    
 0.819
AAWM_09663
Inheritance of peroxisomes protein 2.
   
 0.775
AAWM_09665
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.775
AAWM_09742
Ubiquitin-60S ribosomal protein L40.
    
  0.752
AAWM_10038
Werner syndrome ATP-dependent helicase homolog.
  
 
 0.740
AAWM_02184
Actin-like protein arp5; Belongs to the actin family.
    
 0.731
AAWM_06486
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.729
AAWM_01349
Ubiquitin-40S ribosomal protein S27a.
    
  0.726
AAWM_06897
BZIP domain-containing protein.
    
  0.726
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.