STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFA_08979WD40 repeat-containing protein. (771 aa)    
Predicted Functional Partners:
DFA_00336
RGS domain-containing protein.
    
 0.737
DFA_03015
C2 tensin-type domain-containing protein.
    
 0.552
DFA_08322
ANK_REP_REGION domain-containing protein.
  
 
  0.524
lrrA
Leucine-rich repeat-containing protein.
    
 0.512
DFA_02966
ANK_REP_REGION domain-containing protein.
  
     0.508
DFA_00687
Uncharacterized protein.
   
 0.471
DFA_06907
Uncharacterized protein.
  
 
0.419
Your Current Organism:
Cavenderia fasciculata
NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.