STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFA_12220Uncharacterized protein. (361 aa)    
Predicted Functional Partners:
lrlA
G-protein-coupled receptor family protein.
    
 0.638
pgtD
IPT/TIG domain-containing protein.
    
  0.613
tgrG1
Immunoglobulin E-set domain-containing protein.
    
 0.457
DFA_04974
Uncharacterized protein.
    
 0.457
DFA_07351
EGF-like domain-containing protein.
    
 0.457
sadA
Substrate adhesion molecule.
    
 0.457
DFA_08428
Uncharacterized protein.
    
 0.457
DFA_08431
Uncharacterized protein.
    
 0.457
DFA_09208
Uncharacterized protein.
    
 0.457
DFA_09547
Uncharacterized protein.
    
 0.457
Your Current Organism:
Cavenderia fasciculata
NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.