STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000787815_03252Unannotated protein. (310 aa)    
Predicted Functional Partners:
GCA_000787815_00544
Unannotated protein.
  
     0.772
GCA_000787815_03253
Unannotated protein.
       0.584
GCA_000787815_00924
Unannotated protein.
 
 
 0.494
GCA_000787815_03251
Unannotated protein.
       0.468
GCA_000787815_02635
Unannotated protein.
  
 
 
0.433
GCA_000787815_07603
Unannotated protein.
  
 
  0.418
GCA_000787815_03254
Unannotated protein.
  
    0.403
GCA_000787815_05156
Unannotated protein.
  
  
  0.402
Your Current Organism:
Streptacidiphilus neutrinimicus
NCBI taxonomy Id: 105420
Other names: DSM 41755, JCM 12365, KCTC 9911, NBRC 100921, S. neutrinimicus, Streptacidiphilus neutrinimicus Kim et al. 2003, soil actinomycete DSM 41755, strain JL206
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.