STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000787815_03359Unannotated protein. (117 aa)    
Predicted Functional Partners:
GCA_000787815_06769
Unannotated protein.
  
  
 
0.782
GCA_000787815_03371
Unannotated protein.
  
     0.774
GCA_000787815_03430
Unannotated protein.
  
     0.599
GCA_000787815_00703
Unannotated protein.
  
    0.595
GCA_000787815_03512
Unannotated protein.
  
     0.571
GCA_000787815_03388
Unannotated protein.
  
     0.548
GCA_000787815_00075
Unannotated protein.
  
    0.533
GCA_000787815_03443
Unannotated protein.
  
     0.528
GCA_000787815_05462
Unannotated protein.
  
     0.511
GCA_000787815_00165
Unannotated protein.
  
     0.508
Your Current Organism:
Streptacidiphilus neutrinimicus
NCBI taxonomy Id: 105420
Other names: DSM 41755, JCM 12365, KCTC 9911, NBRC 100921, S. neutrinimicus, Streptacidiphilus neutrinimicus Kim et al. 2003, soil actinomycete DSM 41755, strain JL206
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.