STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000787815_04081Unannotated protein. (556 aa)    
Predicted Functional Partners:
GCA_000787815_04176
Unannotated protein.
  
    0.789
GCA_000787815_04082
Unannotated protein.
 
     0.702
GCA_000787815_04086
Unannotated protein.
       0.630
GCA_000787815_04083
Unannotated protein.
       0.628
GCA_000787815_04084
Unannotated protein.
       0.628
GCA_000787815_04085
Unannotated protein.
       0.628
GCA_000787815_07399
Unannotated protein.
  
     0.563
GCA_000787815_06164
Unannotated protein.
    
  0.537
GCA_000787815_04080
Unannotated protein.
       0.502
GCA_000787815_04079
Unannotated protein.
       0.484
Your Current Organism:
Streptacidiphilus neutrinimicus
NCBI taxonomy Id: 105420
Other names: DSM 41755, JCM 12365, KCTC 9911, NBRC 100921, S. neutrinimicus, Streptacidiphilus neutrinimicus Kim et al. 2003, soil actinomycete DSM 41755, strain JL206
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.