STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000787815_05862Unannotated protein. (285 aa)    
Predicted Functional Partners:
GCA_000787815_06870
Unannotated protein.
 
  
 0.935
GCA_000787815_07523
Unannotated protein.
    
   0.727
GCA_000787815_05861
Unannotated protein.
       0.646
GCA_000787815_05860
Unannotated protein.
       0.576
GCA_000787815_00836
Unannotated protein.
   
 
  0.523
GCA_000787815_07425
Unannotated protein.
   
 
  0.523
GCA_000787815_01897
Unannotated protein.
  
 
 0.508
GCA_000787815_03068
Unannotated protein.
  
 
 0.508
GCA_000787815_05859
Unannotated protein.
       0.508
GCA_000787815_05871
Unannotated protein.
 
  
 0.442
Your Current Organism:
Streptacidiphilus neutrinimicus
NCBI taxonomy Id: 105420
Other names: DSM 41755, JCM 12365, KCTC 9911, NBRC 100921, S. neutrinimicus, Streptacidiphilus neutrinimicus Kim et al. 2003, soil actinomycete DSM 41755, strain JL206
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.