STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM03407.1BolA-like protein; KEGG: apb:SAR116_1909 3.3e-11 BolA family protein K05527; Belongs to the BolA/IbaG family. (94 aa)    
Predicted Functional Partners:
EHM02908.1
Monothiol glutaredoxin, Grx4 family; KEGG: apb:SAR116_0673 1.4e-33 glutaredoxin-like protein K07390; Psort location: Cytoplasmic, score: 7.50; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 0.975
EHM03408.1
KEGG: apb:SAR116_1306 6.5e-13 TPR repeat protein; Psort location: Cytoplasmic, score: 7.50.
       0.705
EHM03405.1
DnaJ domain protein; KEGG: apb:SAR116_1908 1.3e-14 heat shock protein DnaJ domain protein.
   
   0.661
EHM03404.1
Cobaltochelatase, CobS subunit; KEGG: acr:Acry_1712 7.9e-152 cobalt chelatase, pCobS small subunit K09882; Psort location: Cytoplasmic, score: 7.50.
 
     0.642
EHM03406.1
Hypothetical protein.
       0.620
EHM03403.1
KEGG: acr:Acry_1711 8.7e-233 cobalt chelatase, pCobT subunit K09883; Psort location: Cytoplasmic, score: 7.50.
       0.528
EHL96922.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87.
  
    0.510
EHL98149.1
KEGG: gbe:GbCGDNIH1_0685 4.9e-33 DNA starvation/stationary phase protection protein Dps K04047; Psort location: Cytoplasmic, score: 9.97; Belongs to the Dps family.
   
    0.483
EHL96001.1
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
      
 0.418
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
      
 0.410
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.