STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM03235.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (70 aa)    
Predicted Functional Partners:
EHM03236.1
Sigma-70 region 2; KEGG: reh:H16_B1727 1.4e-17 prtI; DNA-directed RNA polymerase sigma subunit PrtI (ECF sigma factor) K03088; Psort location: Cytoplasmic, score: 9.67; Belongs to the sigma-70 factor family. ECF subfamily.
       0.777
EHM03234.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gbe:GbCGDNIH1_0757 1.5e-61 sensory transduction protein kinase K00936; Psort location: CytoplasmicMembrane, score: 8.16.
       0.649
EHM03237.1
Sigma-70 region 2; KEGG: reh:H16_A3447 2.1e-16 rpoE5; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K03088; Psort location: CytoplasmicMembrane, score: 9.55; Belongs to the sigma-70 factor family. ECF subfamily.
       0.456
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.