STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM03156.1Tat pathway signal sequence domain protein; KEGG: pol:Bpro_4551 7.9e-33 methylitaconate delta2-delta3-isomerase K09788. (327 aa)    
Predicted Functional Partners:
EHM02779.1
Membrane protein; KEGG: apb:SAR116_1210 1.7e-101 integral membrane protein, putative K07793; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.811
EHM02059.1
Membrane protein; KEGG: apb:SAR116_1210 1.2e-91 integral membrane protein, putative K07793; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.811
EHL99513.1
Membrane protein; KEGG: apb:SAR116_1210 8.3e-86 integral membrane protein, putative K07793; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.811
EHL99993.1
Membrane protein; KEGG: apb:SAR116_1210 1.0e-112 integral membrane protein, putative K07793; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.809
EHL97880.1
Membrane protein; KEGG: apb:SAR116_1210 1.1e-81 integral membrane protein, putative K07793; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.808
EHM03178.1
Membrane protein; KEGG: apb:SAR116_1210 4.8e-97 integral membrane protein, putative K07793; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.807
EHM03157.1
FAH family protein; KEGG: bch:Bcen2424_6601 2.5e-77 5-carboxymethyl-2-hydroxymuconate delta-isomerase; Psort location: Cytoplasmic, score: 7.50.
       0.513
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.