STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM03181.1IclR helix-turn-helix protein; KEGG: rsa:RSal33209_1322 0.00086 urocanate hydratase K01712. (220 aa)    
Predicted Functional Partners:
EHM01696.1
IclR helix-turn-helix protein; KEGG: rsa:RSal33209_1322 1.7e-07 urocanate hydratase K01712.
  
     0.703
EHL98628.1
Transcriptional regulator, IclR family protein; KEGG: hiq:CGSHiGG_08780 1.1e-17 araD; L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 7.50.
  
     0.699
EHM02696.1
IclR helix-turn-helix protein; KEGG: apb:SAR116_2133 2.7e-16 transcriptional regulator, IclR family; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.692
EHL96191.1
IclR helix-turn-helix protein; KEGG: msv:Mesil_1587 5.7e-09 transcriptional regulator, IclR family; K01895 acetyl-CoA synthetase; Psort location: Cytoplasmic, score: 7.50.
  
     0.688
EHM01871.1
IclR helix-turn-helix protein; KEGG: hiq:CGSHiGG_08780 1.7e-07 araD; L-ribulose-5-phosphate 4-epimerase; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.671
EHM02692.1
KEGG: apb:SAR116_2133 6.2e-12 transcriptional regulator, IclR family; Psort location: Cytoplasmic, score: 7.50.
  
     0.636
EHM01767.1
IclR helix-turn-helix protein; KEGG: rsa:RSal33209_1322 2.5e-09 urocanate hydratase K01712; Psort location: Cytoplasmic, score: 7.50.
  
     0.634
EHM02259.1
IclR helix-turn-helix protein; KEGG: apb:SAR116_0297 5.7e-06 transcriptional regulator, IclR family, putative; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.618
EHL96209.1
IclR helix-turn-helix protein; KEGG: reu:Reut_D6476 2.7e-09 enoyl-CoA hydratase/isomerase; K01692 enoyl-CoA hydratase; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.612
EHM00811.1
KEGG: apb:SAR116_2133 5.1e-15 transcriptional regulator, IclR family; Psort location: Cytoplasmic, score: 7.50.
  
     0.609
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.