STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
serSserine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (422 aa)    
Predicted Functional Partners:
EHL99001.1
KEGG: bur:Bcep18194_A3873 4.6e-243 beta-ketoacyl synthase; K00344 NADPH2:quinone reductase K10817; Psort location: CytoplasmicMembrane, score: 8.78.
   
 
 0.963
EHL98854.1
Hypothetical protein; KEGG: hsa:10847 5.3e-07 SRCAP, DOMO1, EAF1, FLJ44499, KIAA0309, SWR1; Snf2-related CREBBP activator protein; K11661 helicase SRCAP.
   
 
 0.963
EHL98350.1
Phosphopantetheine attachment domain protein; KEGG: bur:Bcep18194_A3873 2.3e-48 beta-ketoacyl synthase; K00344 NADPH2:quinone reductase K10817; Psort location: CytoplasmicMembrane, score: 9.51.
   
 
 0.963
EHL97017.1
Hypothetical protein; KEGG: bur:Bcep18194_A3873 5.5e-37 beta-ketoacyl synthase; K00344 NADPH2:quinone reductase K10817; Psort location: CytoplasmicMembrane, score: 9.96.
   
 
 0.963
EHL96777.1
GroES-like protein; KEGG: bur:Bcep18194_A3873 3.7e-38 beta-ketoacyl synthase; K00344 NADPH2:quinone reductase K10817; Psort location: CytoplasmicMembrane, score: 9.51.
   
 
 0.963
EHM02883.1
Acyltransferase; KEGG: cag:Cagg_0248 3.5e-23 phospholipid/glycerol acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.940
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.894
trmB
Putative tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
 
 0.892
EHM01892.1
Acyl carrier protein; KEGG: osa:4332854 0.00026 Os03g0352800; hypothetical protein; K03955 NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.886
tatB
Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
 
     0.850
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.