STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM02927.1Endonuclease/exonuclease/phosphatase family protein; KEGG: bme:BMEII0240 1.4e-19 dioxygenase K06896; Psort location: Cytoplasmic, score: 7.50. (250 aa)    
Predicted Functional Partners:
EHM02928.1
KEGG: nhl:Nhal_1635 2.7e-144 phospholipase D; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.990
EHM03550.1
Hypothetical protein.
    
   0.897
EHL96589.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.897
EHM02868.1
Maltose alpha-D-glucosyltransferase; KEGG: gbe:GbCGDNIH1_0751 0. phosphotransferase family protein K05343; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.773
EHM02039.1
Phospholipase D domain protein; KEGG: xca:xccb100_1455 3.2e-100 cls4; cardiolipin synthase family enzyme; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
  0.648
EHM02864.1
4-alpha-glucanotransferase; KEGG: gbe:GbCGDNIH1_0748 1.6e-169 4-alpha-glucanotransferase K00705; Psort location: Cytoplasmic, score: 9.97.
    
 0.534
trpS
tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.532
EHM03324.1
Hypothetical protein; KEGG: rhi:NGR_c09290 9.0e-59 lysyl-tRNA synthetase 2 K07027; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.463
EHL96503.1
Hypothetical protein; KEGG: rhi:NGR_c09290 2.4e-191 lysyl-tRNA synthetase 2 K07027; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.463
EHM02869.1
Alpha amylase, catalytic domain protein; KEGG: rec:RHECIAT_PC0000470 1.2e-233 putative alpha amylase protein; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.438
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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