STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM02692.1KEGG: apb:SAR116_2133 6.2e-12 transcriptional regulator, IclR family; Psort location: Cytoplasmic, score: 7.50. (256 aa)    
Predicted Functional Partners:
EHM02259.1
IclR helix-turn-helix protein; KEGG: apb:SAR116_0297 5.7e-06 transcriptional regulator, IclR family, putative; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.775
EHM01696.1
IclR helix-turn-helix protein; KEGG: rsa:RSal33209_1322 1.7e-07 urocanate hydratase K01712.
  
     0.774
EHM01767.1
IclR helix-turn-helix protein; KEGG: rsa:RSal33209_1322 2.5e-09 urocanate hydratase K01712; Psort location: Cytoplasmic, score: 7.50.
  
     0.774
EHM01728.1
IclR helix-turn-helix protein; KEGG: rsa:RSal33209_1322 1.9e-14 urocanate hydratase K01712; Psort location: Cytoplasmic, score: 7.50.
  
     0.772
EHL99888.1
IclR helix-turn-helix protein; KEGG: rsa:RSal33209_1322 8.2e-07 urocanate hydratase K01712; Psort location: Cytoplasmic, score: 7.50.
  
     0.752
EHL99945.1
IclR helix-turn-helix protein; KEGG: hiq:CGSHiGG_08780 1.9e-10 araD; L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 7.50.
  
     0.738
EHM03181.1
IclR helix-turn-helix protein; KEGG: rsa:RSal33209_1322 0.00086 urocanate hydratase K01712.
  
     0.636
EHM02691.1
KEGG: hse:Hsero_3747 3.5e-55 major facilitator superfamily permease; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.625
EHM02689.1
KEGG: ddr:Deide_3p00680 6.6e-61 putative short-chain dehydrogenase; K00059 3-oxoacyl-[acyl-carrier protein] reductase; Psort location: Cytoplasmic, score: 9.97.
  
    0.597
EHM02688.1
KEGG: sme:SM_b21100 7.5e-37 putative polysaccharide deacetylase; Psort location: Cytoplasmic, score: 7.50.
       0.591
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.