STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM02259.1IclR helix-turn-helix protein; KEGG: apb:SAR116_0297 5.7e-06 transcriptional regulator, IclR family, putative; Psort location: CytoplasmicMembrane, score: 8.16. (259 aa)    
Predicted Functional Partners:
EHM02692.1
KEGG: apb:SAR116_2133 6.2e-12 transcriptional regulator, IclR family; Psort location: Cytoplasmic, score: 7.50.
  
     0.775
EHM00837.1
IclR helix-turn-helix protein; KEGG: apb:SAR116_2133 1.3e-16 transcriptional regulator, IclR family; Psort location: Cytoplasmic, score: 7.50.
  
     0.775
EHL98628.1
Transcriptional regulator, IclR family protein; KEGG: hiq:CGSHiGG_08780 1.1e-17 araD; L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 7.50.
  
     0.775
EHL96329.1
KEGG: apb:SAR116_2133 4.3e-18 transcriptional regulator, IclR family; Psort location: Cytoplasmic, score: 7.50.
  
     0.775
EHM02711.1
IclR helix-turn-helix protein; KEGG: msv:Mesil_1587 9.4e-15 transcriptional regulator, IclR family; K01895 acetyl-CoA synthetase; Psort location: Cytoplasmic, score: 7.50.
  
     0.774
EHM02258.1
KEGG: mes:Meso_0398 0. hydantoinase/oxoprolinase; K01469 5-oxoprolinase (ATP-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
       0.774
EHM01871.1
IclR helix-turn-helix protein; KEGG: hiq:CGSHiGG_08780 1.7e-07 araD; L-ribulose-5-phosphate 4-epimerase; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.774
EHL96209.1
IclR helix-turn-helix protein; KEGG: reu:Reut_D6476 2.7e-09 enoyl-CoA hydratase/isomerase; K01692 enoyl-CoA hydratase; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.774
EHM02254.1
Putative phosphonate C-P lyase system protein PhnK; KEGG: ttu:TERTU_2101 1.2e-123 glutathione import ATP-binding protein GsiA K02031:K02032; Psort location: CytoplasmicMembrane, score: 9.96; Belongs to the ABC transporter superfamily.
       0.773
EHM02255.1
Putative D,D-dipeptide transport system permease protein DdpC; KEGG: bmi:BMEA_B0781 4.2e-59 nikC; nickel transporter permease NikC K02034; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.