STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM02296.1Tat pathway signal sequence domain protein; Psort location: Cytoplasmic, score: 7.50. (422 aa)    
Predicted Functional Partners:
EHM02294.1
ABC transporter, permease protein; KEGG: bwe:BcerKBAB4_1203 2.5e-29 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.976
EHM02295.1
KEGG: apb:SAR116_1792 2.9e-28 ABC transporter, permease protein, putative K02054; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.976
EHM02297.1
KEGG: mpt:Mpe_A3375 1.0e-96 ABC transporter ATP-binding protein K02052; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
  0.963
EHL96729.1
KEGG: reh:H16_A3073 8.0e-33 hydantoin racemase K01797; Psort location: Cytoplasmic, score: 7.50.
 
     0.715
EHM03343.1
KEGG: reh:H16_A3073 5.5e-41 hydantoin racemase K01797; Psort location: Cytoplasmic, score: 7.50.
 
     0.656
EHM03384.1
KEGG: bja:bll7201 2.5e-36 putative hydantoin racemase; K01797; Psort location: CytoplasmicMembrane, score: 8.16.
 
     0.623
EHM02293.1
KEGG: rcp:RCAP_rcc02188 1.9e-86 diguanylate cyclase/phosphodiesterase; Psort location: CytoplasmicMembrane, score: 8.78.
       0.526
EHM02298.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.518
EHL97896.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.515
EHM02251.1
ABC transporter, permease protein; KEGG: mmw:Mmwyl1_3520 8.6e-68 ornithine carbamoyltransferase K11074; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.511
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.