STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM02200.1KEGG: srt:Srot_1538 0.00052 Asp/Glu/hydantoin racemase; K01797; Psort location: Cytoplasmic, score: 7.50. (208 aa)    
Predicted Functional Partners:
EHM02199.1
YgbK domain protein; KEGG: hiq:CGSHiGG_08665 8.0e-104 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase.
 
     0.832
EHM01758.1
YgbK domain protein; KEGG: hiq:CGSHiGG_08665 2.8e-15 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Psort location: Cytoplasmic, score: 7.50.
 
     0.549
EHL99946.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.523
EHM02201.1
Citrate transporter; Psort location: CytoplasmicMembrane, score: 10.00.
       0.517
EHM02202.1
SAF domain protein; KEGG: bpu:BPUM_1429 5.0e-31 homoserine dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
     0.494
EHM02096.1
YgbK domain protein; KEGG: hiq:CGSHiGG_08665 5.5e-73 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Psort location: Cytoplasmic, score: 7.50.
 
     0.475
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.