STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM02135.1Tat pathway signal sequence domain protein; KEGG: abu:Abu_1730 5.4e-07 two-component sensor histidine kinase. (338 aa)    
Predicted Functional Partners:
EHM03492.1
KEGG: apb:SAR116_1967 2.5e-29 ABC transporter, permease protein K02050; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.890
EHM03493.1
ABC transporter, ATP-binding protein; KEGG: reh:H16_A0468 1.9e-77 ABC transporter ATPase K02049; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.876
EHM01745.1
KEGG: apb:SAR116_1967 3.4e-32 ABC transporter, permease protein K02050; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.777
EHM02400.1
KEGG: apb:SAR116_1967 4.7e-60 ABC transporter, permease protein K02050; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.754
EHM02352.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: mno:Mnod_4585 1.4e-95 multi-sensor hybrid histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78.
    
  0.713
EHM02959.1
ABC transporter, permease protein; KEGG: pam:PANA_1376 1.3e-30 ssuD; SsuD; K04091 alkanesulfonate monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.687
EHM02957.1
KEGG: rha:RHA1_ro08170 8.7e-27 ABC transporter, permease component K01552; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.679
EHL98143.1
KEGG: mdi:METDI1668 1.2e-31 ABC transporter, permease component; putative taurine transporter K02050; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.665
EHM01869.1
KEGG: mdi:METDI1668 1.5e-24 ABC transporter, permease component; putative taurine transporter K02050; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.644
EHM03529.1
Response regulator receiver domain protein; KEGG: mxa:MXAN_3879 3.4e-17 sensory box sensor histidine kinase/response regulator K00936; Psort location: CytoplasmicMembrane, score: 8.16.
    
  0.634
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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