STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM02055.1HNH endonuclease domain protein; KEGG: gox:GOX1953 9.7e-76 5-methylcytosine-specific restriction protein. (187 aa)    
Predicted Functional Partners:
EHL98892.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.715
EHM02057.1
tRNA ligase class I, catalytic domain protein; KEGG: gdj:Gdia_3242 2.4e-95 glutamyl-tRNA synthetase class Ic; K01894 glutamyl-Q tRNA(Asp) synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.651
EHM02056.1
Phospholipase/carboxylesterase; KEGG: apb:SAR116_1152 1.8e-33 predicted esterase K06999; Psort location: Cytoplasmic, score: 7.50.
       0.622
EHL98127.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.594
EHL97901.1
KEGG: rce:RC1_2499 1.0e-46 lonD; ATP-dependent protease La domain protein LonD K07157; Psort location: Cytoplasmic, score: 9.97.
  
     0.525
EHM01500.1
DNA (cytosine-5-)-methyltransferase; KEGG: gbe:GbCGDNIH1_1859 8.0e-136 adenine-specific methyltransferase K13581; Psort location: Cytoplasmic, score: 7.50; Belongs to the N(4)/N(6)-methyltransferase family.
 
   
 0.517
EHM01145.1
Phage terminase, small subunit, P27 family; Psort location: Cytoplasmic, score: 7.50.
  
    0.451
EHM01413.1
Putative phage terminase, large subunit; Psort location: CytoplasmicMembrane, score: 8.16.
  
  
 0.424
EHM01146.1
Putative phage terminase, large subunit; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.424
EHM00539.1
Putative phage terminase, large subunit; Psort location: CytoplasmicMembrane, score: 8.16.
  
  
 0.424
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.