STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01926.1Putative transcriptional activatory protein AadR; KEGG: eci:UTI89_C3860 2.1e-10 crp; cAMP-regulatory protein K10914; Psort location: Cytoplasmic, score: 9.97. (231 aa)    
Predicted Functional Partners:
EHM02671.1
Tetratricopeptide repeat protein; KEGG: rle:RL3062 2.9e-29 cya3; putative adenylate cyclase; Psort location: Cytoplasmic, score: 7.50.
   
 0.989
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.924
EHL96921.1
KEGG: gbe:GbCGDNIH1_0704 0. glutamate synthase [NADPH] large chain K00265; Psort location: Cytoplasmic, score: 7.50.
    
 0.919
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.918
EHM03348.1
Response regulator receiver domain protein; KEGG: hne:HNE_1508 3.5e-229 sensor histidine kinase/response regulator K00936; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.908
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.902
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
 
 0.895
EHM03250.1
PAS domain S-box protein; KEGG: chl:Chy400_4098 1.8e-123 multi-sensor hybrid histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.873
EHM02035.1
PAS domain S-box protein; KEGG: dac:Daci_1508 9.9e-223 multi-sensor hybrid histidine kinase; Psort location: CytoplasmicMembrane, score: 9.96.
   
 0.873
EHM01925.1
Coproporphyrinogen dehydrogenase; KEGG: sno:Snov_0092 5.1e-102 oxygen-independent coproporphyrinogen III oxidase K02495; Psort location: Cytoplasmic, score: 9.97; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.855
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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