STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01968.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (250 aa)    
Predicted Functional Partners:
EHM01967.1
Putative HTH-type transcriptional regulator HmrR; KEGG: eci:UTI89_C3737 1.8e-19 zntR; zinc-responsive transcriptional regulator K13638; Psort location: Cytoplasmic, score: 7.50.
       0.723
EHM01969.1
Hydrolase, alpha/beta domain protein; KEGG: bbt:BBta_4223 2.7e-39 putative lipase/esterase K01046; Psort location: Cytoplasmic, score: 9.97.
       0.592
EHM01966.1
Hypothetical protein.
       0.536
htpX
Peptidase, M48 family; KEGG: rce:RC1_2347 1.9e-96 htpX; protease HtpX-like protein, putative K03799; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the peptidase M48B family.
   
    0.483
EHM01975.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
   
  
 0.426
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.