STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01688.1IclR helix-turn-helix protein; KEGG: hiq:CGSHiGG_08780 1.1e-17 araD; L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 7.50. (286 aa)    
Predicted Functional Partners:
EHL96329.1
KEGG: apb:SAR116_2133 4.3e-18 transcriptional regulator, IclR family; Psort location: Cytoplasmic, score: 7.50.
  
     0.775
EHM01808.1
IclR helix-turn-helix protein; KEGG: apb:SAR116_2133 2.0e-08 transcriptional regulator, IclR family; Psort location: Cytoplasmic, score: 7.50.
  
     0.774
EHM01696.1
IclR helix-turn-helix protein; KEGG: rsa:RSal33209_1322 1.7e-07 urocanate hydratase K01712.
  
     0.771
EHM03131.1
IclR helix-turn-helix protein; KEGG: hiq:CGSHiGG_08780 4.2e-05 araD; L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 7.50.
  
     0.766
EHM01728.1
IclR helix-turn-helix protein; KEGG: rsa:RSal33209_1322 1.9e-14 urocanate hydratase K01712; Psort location: Cytoplasmic, score: 7.50.
  
     0.761
EHL99945.1
IclR helix-turn-helix protein; KEGG: hiq:CGSHiGG_08780 1.9e-10 araD; L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 7.50.
  
     0.759
EHM01689.1
Alcohol dehydrogenase, iron-dependent; KEGG: azl:AZL_b03380 1.7e-135 adh; alcohol dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
    
  0.681
EHM02614.1
IclR helix-turn-helix protein; KEGG: hiq:CGSHiGG_08780 4.2e-05 araD; L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 7.50.
  
     0.659
EHM01691.1
KEGG: mno:Mnod_1463 3.5e-103 dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the DapA family.
  
    0.657
EHM01690.1
BNR/Asp-box repeat protein; KEGG: pva:Pvag_0157 8.2e-134 sialidase precursor (neuraminidase); Psort location: Cytoplasmic, score: 7.50.
       0.648
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.