STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lspASignal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. (165 aa)    
Predicted Functional Partners:
ileS
isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
  
 0.980
EHM01553.1
Hypothetical protein.
     
 0.861
EHM01551.1
Peptidase M16 inactive domain protein; KEGG: rru:Rru_A2973 2.2e-76 peptidase M16-like K01412; Psort location: CytoplasmicMembrane, score: 9.55.
  
    0.688
EHM01552.1
Tat pathway signal sequence domain protein; KEGG: rru:Rru_A2972 1.9e-88 peptidase M16-like K01412; Psort location: CytoplasmicMembrane, score: 9.87.
  
    0.688
EHL98224.1
PPIC-type PPIASE domain protein; KEGG: gbe:GbCGDNIH1_2196 9.5e-101 peptidyl-prolyl cis-trans isomerase K03771.
  
  
 0.612
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
 
 
 
 0.558
EHM01312.1
Cadmium-exporting ATPase; KEGG: pde:Pden_0212 4.2e-201 heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.543
EHM01549.1
KEGG: apb:SAR116_1141 1.3e-78 DNA mismatch repair enzyme K03572; Psort location: Cytoplasmic, score: 7.50.
 
     0.529
EHL98688.1
PTS system fructose-specific EIIBBC component; KEGG: pap:PSPA7_1585 7.5e-156 fruA; phosphotransferase system, fructose-specific IIBC component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.525
EHM02548.1
Riboflavin biosynthesis protein RibF; KEGG: gbe:GbCGDNIH1_0467 3.0e-104 FMN adenylyltransferase K11753; Psort location: Cytoplasmic, score: 7.50; Belongs to the ribF family.
 
  
 0.507
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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