STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01053.1KEGG: rce:RC1_1358 1.9e-182 betB; betaine aldehyde dehydrogenase; Psort location: Cytoplasmic, score: 9.95. (503 aa)    
Predicted Functional Partners:
EHL96921.1
KEGG: gbe:GbCGDNIH1_0704 0. glutamate synthase [NADPH] large chain K00265; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.919
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
   
  0.902
EHL99001.1
KEGG: bur:Bcep18194_A3873 4.6e-243 beta-ketoacyl synthase; K00344 NADPH2:quinone reductase K10817; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.900
EHL98854.1
Hypothetical protein; KEGG: hsa:10847 5.3e-07 SRCAP, DOMO1, EAF1, FLJ44499, KIAA0309, SWR1; Snf2-related CREBBP activator protein; K11661 helicase SRCAP.
  
 0.900
EHL98350.1
Phosphopantetheine attachment domain protein; KEGG: bur:Bcep18194_A3873 2.3e-48 beta-ketoacyl synthase; K00344 NADPH2:quinone reductase K10817; Psort location: CytoplasmicMembrane, score: 9.51.
  
 0.900
EHL97017.1
Hypothetical protein; KEGG: bur:Bcep18194_A3873 5.5e-37 beta-ketoacyl synthase; K00344 NADPH2:quinone reductase K10817; Psort location: CytoplasmicMembrane, score: 9.96.
  
 0.900
EHL96777.1
GroES-like protein; KEGG: bur:Bcep18194_A3873 3.7e-38 beta-ketoacyl synthase; K00344 NADPH2:quinone reductase K10817; Psort location: CytoplasmicMembrane, score: 9.51.
  
 0.900
EHM02589.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
   
 0.803
EHL99769.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
0.800
EHM00994.1
KEGG: cse:Cseg_1074 2.8e-284 malate dehydrogenase K00029; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.760
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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